BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D06SP1|AL426512
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig750 1609 0.0
>3x_Contig750
Length = 2436
Score = 1609 bits (810), Expect = 0.0
Identities = 834/840 (99%), Gaps = 3/840 (0%)
Strand = Plus / Plus
Query: 3 gaagtctcaaaggctcaaacatctattcacttagttgaattgcatgaaatgttgtcactg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 gaagtctcaaaggctcaaacatctattcacttagttgaattgcatgaaatgttgtcactg 1289
Query: 63 ccagctcctttcgaattatctgtttttgaactagaaaaatacttaatccaagctgctatg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 ccagctcctttcgaattatctgtttttgaactagaaaaatacttaatccaagctgctatg 1349
Query: 123 gatgtattatkttatgtatttccattgaccatgaaactgataccgtttcatttgcccaag 182
|||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 gatg-attatgtta-gtatttccattgaccatgaaactgataccgtttcatttgcccaag 1407
Query: 183 atccatttgtacgcttggcaagcatctcttgttgaagttcccgaatctagcacttctgat 242
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 atccatttg-acgcttggcaagcatctcttgttgaagttcccgaatctagcacttctgat 1466
Query: 243 gaagcaaagaactctgaatccgaagaggaaacctcccaagaaacgcatgctgatgaggaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 gaagcaaagaactctgaatccgaagaggaaacctcccaagaaacgcatgctgatgaggaa 1526
Query: 303 cagaatgaacaagtcttcactcgtaactcagaagtccgttctaagttgactgatctatcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 cagaatgaacaagtcttcactcgtaactcagaagtccgttctaagttgactgatctatcc 1586
Query: 363 aagatcttaaaggccaacgaagaatacgaaaatggttcttactattacagagtcaaactt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 aagatcttaaaggccaacgaagaatacgaaaatggttcttactattacagagtcaaactt 1646
Query: 423 gtgcgtgaagaattgatcagaagaaaggaagaagttatcaagttagaaaaggaagctgct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 gtgcgtgaagaattgatcagaagaaaggaagaagttatcaagttagaaaaggaagctgct 1706
Query: 483 gaaattagagctaagagtaacgctgaacgcmagaagagaagcgaagaagaaaacaagatt 542
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1707 gaaattagagctaagagtaacgctgaacgcaagaagagaagcgaagaagaaaacaagatt 1766
Query: 543 cttgccaagaaggctctagaagaaaggcaaagacgtatggctgaggaaaaggctgctgtt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 cttgccaagaaggctctagaagaaaggcaaagacgtatggctgaggaaaaggctgctgtt 1826
Query: 603 gaatcttctatggagaaakaagcggaacgtcgtgctgaagaaatgatggaacgtgagaga 662
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 gaatcttctatggagaaagaagcggaacgtcgtgctgaagaaatgatggaacgtgagaga 1886
Query: 663 gaagcgatccatgaacaagaaatgaagaagttgattgctgaaactaatgccaatggtgtc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 gaagcgatccatgaacaagaaatgaagaagttgattgctgaaactaatgccaatggtgtc 1946
Query: 723 attcatattgatccaaaggaagccaagaacctaacaagtgataagatcaaccaaatggtc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 attcatattgatccaaaggaagccaagaacctaacaagtgataagatcaaccaaatggtc 2006
Query: 783 attgaacaagtagccaagaacaagaaggatttgactgaacgtatgacctatgccttcaag 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 attgaacaagtagccaagaacaagaaggatttgactgaacgtatgacctatgccttcaag 2066
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7481
Number of Sequences: 1807
Number of extensions: 7481
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)